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1 H BioS t (i) treat treat data d; input patno treat treat; cards; ; run; (i) treat treat

2 data d; input group patno period treat y; label group patno period ; cards; run; t (i) proc gplot data d; plot y * period patno; by group; run; symbol y

3 (ii) t proc ttest data d; paired treat * treat; run; 3

4 paired-t:proc ttest TTEST N treat - treat t t Pr > t treat - treat

5 (iii) : dif i i dif i dif i N(µ, σ ) H : µ H : µ t t (ii) µ ( ) σ { ( 3.333) + ( ) + ( 3.333) + ( 3.333) + ( ) + ( ) } (ii) σ σ (ii) 95 t [ ] [ ] σ σ µ + t(5,.5), µ + t(5,.975) , [.686, 7.353] σ V[ µ] H : µ (t ) t µ bσ

6 p SAS data p value; p * ( - cdf( t,.3, 5)); run; p.86 (i) proc glm proc glm data d; class treat patano; model y treat patno/ ss3 solution p; run; paierd-t : proc glm GLM : y F Pr > F Model Error Corrected Total Type III F Pr > F treat patno

7 t Pr > t Intercept B treat B treat. B... patno -6. B patno -.5 B patno 3. B patno 4.5 B patno 5-4. B patno 6. B... Note X X B paierd-t : proc glm GLM (ii) d i (i : i : ) p j (j,, 3, 4, 5, 6) y ij µ + d i + p j + ɛ ij (ɛ ij N(, σ )) () 7

8 y µ + d + p + ɛ y µ + d + p + ɛ y µ + d + p + ɛ y µ + d + p + ɛ y 3 µ + d + p 3 + ɛ 3 y 3 µ + d + p 3 + ɛ 3 y 4 µ + d + p 4 + ɛ 4 () y 4 µ + d + p 4 + ɛ 4 y 5 µ + d + p 5 + ɛ 5 y 5 µ + d + p 5 + ɛ 5 y 6 µ + d + p 6 + ɛ 6 y 6 µ + d + p 6 + ɛ 6 y y y y y 3 8 y 3 7 y, X y 4 8 y 4 8 y 5 5 y 5 y 6 3 y 6, β µ d d p p p 3 p 4 p 5 p 6, ɛ ɛ ɛ ɛ ɛ ɛ 3 ɛ 3 ɛ 4 ɛ 4 ɛ 5 ɛ 5 ɛ 6 ɛ 6 y X β + ɛ (ɛ N(, σ I )) (3) SAS d, p 6 () y µ + d +p +ɛ y µ +p +ɛ y µ + d +p +ɛ y µ +p +ɛ y 3 µ + d +p 3 +ɛ 3 y 3 µ +p 3 +ɛ 3 y 4 µ +p 4 +ɛ 4 (4) y 4 µ + d +p 4 +ɛ 4 y 5 µ +p 5 +ɛ 5 y 5 µ + d +p 5 +ɛ 5 y 6 µ +ɛ 6 y 6 µ + d +ɛ 6 8

9 X, β µ d p p p 3 p 4 p 5 (3) y + X β + ɛ (ɛ N(, σi )) (5) (iii) SAS SAS β β (X X ) X y (6) X X

10 6 6 6 (X X ) X y

11 (6) β (X X ) X y β µ d p 6, p.5, p 3, p 4.5, p 5 4 d, p 5 µ Intercept d treat d treat p 6 patno p.5 patno p 3 patno3 p 4.5 patno4 p 5 4 patno5 p 6 patno6 SAS β ŷ ŷ X β

12 µ d d p p p 3 p 4 p 5 p

13 e , e y ŷ (iv) H : d d p p p 3 p 4 p 5 p 6 H : () d i p j y ij µ + ɛ ij 3

14 y µ + ɛ y µ + ɛ y µ + ɛ y µ + ɛ y 3 µ + ɛ 3 y 3 µ + ɛ 33 y 4 µ + ɛ 4 y 4 µ + ɛ 4 y 5 µ + ɛ 5 y 5 µ + ɛ 5 y 6 µ + ɛ 6 y 6 µ + ɛ 6 y µ + ɛ (ɛ N(, σ I )) µ µ µ ( ) y (7) ( ) ( ) ( y )

15 (7) µ ( ) y ŷ, e ŷ µ (8) e y ŷ (9) * y ŷ }{{} Corrected Total y ŷ }{{} Error + ŷ ŷ }{{} Model y : ŷ : µ ŷ : µ, d, p,, p 5 7 * Corrected Total H Error H Model H H e e + by by 5

16 (CorrectedTotal) y ŷ : (Error) y ŷ : 7 5 (Model) ŷ ŷ : 7 6 (CorrectedTotal) y ŷ e ( 5.667) + ( 4.667) + ( 3.667) (.667) + ( 5.667) (.333) (Error) y ŷ e (.667) + (.3334) (.667) +(.6667) (.8334) (.8334) (Model) ŷ ŷ ( ) + ( 3) + (.8333) ( ) + ( 4.333) (.3333).999 (Error) 5 y ŷ (Model) 6 ŷ ŷ F F Model Error Error σ σ Error e () 6

17 * *3 p 6 5 data p value; p - cdf( F,.7936, 6, 5); run; p.397 (v) H d : d d H d : d d H d () d i y ij µ + p j + ɛ ij (ɛ ij N(, σ )) y µ + p + ɛ y µ + p + ɛ y µ + p + ɛ y µ + p + ɛ y 3 µ + p 3 + ɛ 3 y 3 µ + p 3 + ɛ 3 y 4 µ + p 4 + ɛ 4 y 4 µ + p 4 + ɛ 4 y 5 µ + p 5 + ɛ 5 y 5 µ + p 5 + ɛ 5 y 6 µ + p 6 + ɛ 6 y 6 µ + p 6 + ɛ 6 * bσ σ bσ *3 F 5 by by bσ 7

18 X d, β d µ p p p 3 p 4 p 5 p 6 y X d β d + ɛ (ɛ N(, σ I )) () SAS p 6 X d, β d () y X d β d + ɛ (ɛ N(, σ I )) µ p p p 3 p 4 p 5 β d β d (X dx d ) X dy () 8

19 X dx d (X dx d ) 9

20 X dy () β d (X dx d ) X dy

21 β d µ p p p 3 p 4 p 5 p 6 µ 6.5 p 6 p.5 p 3 p 4.5 p 5 4 p 6 β d ŷ d ŷ d X d βd

22 *4 TypeIII treat H d H d H ŷ ŷ d *4 SAS proc glm data d; class patno; model y patno / solution ss3 p; run;

23 ŷ ŷ d (.6666) + (.6667) + (.6666) + (.6667) + (.6666) + (.6667) +(.6666) + (.6667) + (.6666) + (.6667) + (.6666) + (.6667) ŷ : µ, d, p,, p 5 7 ŷ d : µ, p,, p 5 6 ŷ ŷ d : 7 6 ŷ ŷ d F σ Error F ŷ ŷ d σ p σ 5 data p value; p - cdf( F, 4.55,, 5); run; p.86 TypeIII Treat p (vi) (v) p p t p t t TypeIII treat F (t ) (F ) 3

24 t.5635 ( t ) () σ Error e t t j y j, y j σ dif j y j y j V [dif j ] V [y j ] + V [y j ] σ + σ σ t Treat Treat treat: treat: treat treat (i) proc glm data d; class treat patno period; model y treat patno period / run; solution p ss3; patno(fixed) + period GLM : y F Pr > F Model Error Corrected Total

25 Type III F Pr > F treat patno period t Pr > t Intercept B treat B treat. B... patno -6. B patno -.5 B patno 3. B patno 4.5 B patno 5-4. B patno 6. B... period B period. B... Note:X X B 5

26 patno(fixed) + period GLM (ii) d i (i : i : ) p j (j,, 3, 4, 5, 6) t k (k, ) y ijk µ + d i + p j + t k + ɛ ijk (ɛ ij N(, σ )) (3) y µ + d + p + t + ɛ y µ + d + p + t + ɛ y µ + d + p + t + ɛ y µ + d + p + t + ɛ y 3 µ + d + p 3 + t + ɛ 3 y 3 µ + d + p 3 + t + ɛ 3 y 4 µ + d + p 4 + t + ɛ 4 (4) y 4 µ + d + p 4 + t + ɛ 4 y 5 µ + d + p 5 + t + ɛ 5 y 5 µ + d + p 5 + t + ɛ 5 y 6 µ + d + p 6 + t + ɛ 6 y 6 µ + d + p 6 + t + ɛ 6 6

27 y y y y y y 3 y 3 y 4 y 4 y 5 y 5 y 6 y , X, β µ d d p p p 3 p 4 p 5 p 6 t t, ɛ ɛ ɛ ɛ ɛ ɛ 3 ɛ 3 ɛ 4 ɛ 4 ɛ 5 ɛ 5 ɛ 6 ɛ 6 y X β + ɛ (ɛ N(, σ I )) (5) SAS d, p 6, t y µ +d +p +t +ɛ y µ +p +ɛ y µ +d +p +t +ɛ y µ +p +ɛ y 3 µ +d +p 3 +t +ɛ 3 y 3 µ +p 3 +ɛ 3 y 4 µ +p 4 +t +ɛ 4 (6) y 4 µ +d +p 4 +ɛ 4 y 5 µ +p 5 +t +ɛ 5 y 5 µ +d +p 5 +ɛ 5 y 6 µ +t +ɛ 6 y 6 µ +d +ɛ 6 X, β µ d p p p 3 p 4 p 5 t 7

28 (5) y X β + ɛ (ɛ N(, σ I )) (iii) β β (X X ) X y (7) X X (X X )

29 X y β (7) β (X X ) X y 9

30 β µ d p p p 3 p 4 p 5 t µ , d , p 6, p.5, p 3, p 4.5, p 5 4, t

31 d, p 6, t β µ d d p p p 3 p 4 p 5 p 6 t t µ Intercept d treat d treat p 6 patno p.5 patno p 3 patno3 p 4.5 patno4 p 5 4 patno5 p 6 patno6 t.6667 period t period ŷ ŷ X β

32 e e y ŷ (iv) H : d d p p p 3 p 4 p 5 p 6 t t H : (3) d i, p j, t k y ijk µ + ɛ ijk 3

33 y µ + ɛ y µ + ɛ y µ + ɛ y µ + ɛ y 3 µ + ɛ 3 y 3 µ + ɛ 33 y 4 µ + ɛ 4 y 4 µ + ɛ 4 y 5 µ + ɛ 5 y 5 µ + ɛ 5 y 6 µ + ɛ 6 y 6 µ + ɛ 6 (8) (9) ŷ e ŷ, e y ŷ y ŷ + ŷ ŷ y : ŷ : µ ŷ : µ, d, p,, p 5, t 8 (CorrectedTotal) y ŷ : (Error) y ŷ : 8 4 (Model) ŷ ŷ : 8 7 (CorrectedTotal) y ŷ e ( 5.667) + ( 4.667) + ( 3.667) (.667) + ( 5.667) (.333) 33

34 59.53 (Error) y ŷ e (.8333) + (.6667) (.8333) +( ) (.5) (.5) (Model) ŷ ŷ ( 6) + ( ) + (.5) (.6667) + ( ) (.6667) 4.33 (Error) 4 y ŷ (Model) 7 ŷ ŷ F F Model Error Error σ σ Error e (8) F F 7 by by bσ p 7 4 data p value; p - cdf( F,.8, 7, 4); run; p.66 34

35 (v) H d : d d H d : d d H d H d (3) d i y ijk µ + p j + t k + ɛ ijk y µ + p + t + ɛ y µ + p + t + ɛ y µ + p + t + ɛ y µ + p + t + ɛ y 3 µ + p 3 + t + ɛ 3 y 3 µ + p 3 + t + ɛ 3 y 4 µ + p 4 + t + ɛ 4 y 4 µ + p 4 + t + ɛ 4 y 5 µ + p 5 + t + ɛ 5 y 5 µ + p 5 + t + ɛ 5 y 6 µ + p 6 + t + ɛ 6 y 6 µ + p 6 + t + ɛ 6 X d, β d µ p p p 3 p 4 p 5 p 6 t t y X d β d + ɛ (ɛ N(, σ I )) (9) 35

36 SAS p 6, t X d, β d (9) y X d β d + ɛ (ɛ N(, σ I )) µ p p p 3 p 4 p 5 t β d β d (X dx d ) X dy () X dx d

37 (X dx d ) X dy

38 () β d β d µ p p p 3 p 4 p 5 t p 6, t µ p 6 p.5 p 3 p 4.5 p 5 4 p 6 t.6667 t β d 38

39 ŷ d ŷ d X d βd

40 e d e d y ŷ d H d H d ŷ ŷ d (.6667) (.6667) (.6666) (.6667) (.6667) (.6667) TypeIII ŷ : µ, d, p,, p 5, t 8 ŷ d : µ, p,, p 5, t 7 ŷ ŷ d : 8 7 ŷ ŷ d (8) σ F F ŷ ŷ d σ

41 4 p data p value; p - cdf( F, ,, 4); run; p.4 4

H22 BioS (i) I treat1 II treat2 data d1; input group patno treat1 treat2; cards; ; run; I

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