放射線化学, 97, 29 (2014)

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1 20 5 Absorption spectra of biomolecules over wide energy range are very important to study their radiation effects in terms of the optical approximation proposed by Platzman. Using synchrotron radiation we accumulated absorption spectra of amino acids and bases of nuclear acids. Now we will be able to complete the measurement for all 20 amino acids and all 5 bases of nuclear acids within one year. Here we report mainly about basic techniques to obtain precise data. Keywords: biomolecules, absorption spectra, synchrotron radiation nm Toward the completion of measurement of absorption spectra of 20 amino acids and 5 bases of nuclear acids over wide energy range Kazumichi Nakagawa (Kobe University), TEL: , FAX: , nakagawa@kobe-u.ac.jp X X 1) X 100 ev 2keV 8keV X 30 cm 70% X X K 280 ev 405 ev 530 ev K 1s K 1, 2) X 3) 97 (2014) 29

2 Platzman 4) 5) E σ(e) df/de f- T T df de de E 0 f - f - σ(e) f - T T = 2MeV E = 2MeV df/de σ(e) UVSOR 7B 2 < E < 30 ev 5B 40 < E < 260 ev L- D- L- L- D- D D-L 6) Figure 1. Conically-shaped polyimide (Kapton) sheet and heater in the vacuum sublimation system for preparing amino acid films C mm 10 mm 130 C Figure 1 HPLC 0.1 nm/s SiO nm MgF nm LiF 105 nm 30

3 20 5 X SiN SiC Figure 2 12 mm 1000 nm 30 nm 10% 80 mesh/inch nm X 2005 SPring-8 X 2) / ±2% in situ Figure 3 70 mm Figure 2. Amino acid thin film sublimated onto a collodion film supported by a mesh metal grid. Figure mm 50 mm Figure 3. Novel in situ sublimation system. 97 (2014) 31

4 Figure ev 117 Mb 250 ev Mb 186 S/N 100 in situ in situ σ(e) UVSOR σ(e) ABS(E) = log(i 0 (E)/I(E)) Figure 4 Mb C mol/l L cm ABS(E) E E σ(e) σ(e) σ(e) C mol/l n cm 3 n = CN A /10 3 σ(e) = ln 10 ABS(E) nl 0.6 Absorbance c b a Photon energy E / ev Figure 4. Absorption spectrum of alanine sublimated film in the UV, vacuum UV and soft x- ray regions. Figure 5. UV spectra of adenine ethanol solutions; concentration, M; path length, 0.3 cm (a), 0.5 cm (b), 1 cm (c). Figure 5 C = M L = 1cm L = 0.3 cm 0.5 cm 32

5 20 5 6eV 6eV 4.74 ev σ(4.74 ev) = 36.0Mb Figure 6 UVSOR 4.54 ev 4.74 ev Figure ev ev Figure ev 7.6 ev 5.3 Absorption cross section (E) / Mb Photon energy E / ev Figure 6. Absorption spectrum of adenine sublimated film in the UV, vacuum UV and soft x- ray regions HPLC Figure 2 HPLC 50 μl 50 μl 160 nm 115 nm ABS(E) S cm 2 N F HPLC L n N F = ns L 1 I(E) = I 0 (E)exp σ(e)nl nl ABS(E) σ(e) Figure E = (E n E 0 ) 0 n f 0n f 0n f 0n = 2m e(e n E 0 ) 3 2 Ψ n r s Ψ 0 2 7) df/de f - (ev) 1 σ(e) cm 2 σ(e) = 4π 2 αa 2 0 E df df R = de de 7) α α = e 2 /(2ɛ 0 hc) = 1/ a 0 E R f - 0 S (0) f - ( ) df de = N de Thomas- Kuhn-Reiche TRK 8) 9) Figure 4 Figure 6 TRK Figure 7 10) TRK Figure 7 s 97 (2014) 33

6 4 < E < 250 ev [(Figure 7 df/de )/( )] [27.3/30] [31.0/36] [63.2/64] [60.1/62] [44.1/50] [43.2/42] 12% TRK Absorption cross section (E) / Mb Phe Gly Ala Photon energy E / ev Met Figure 7. Absorption spectra of glycine (Gly), alanine (Ala), phenylalanine (Phe), and methionine (Met) sublimated films in the UV, vacuum UV and soft x-ray regions E ev 50 ev 2 UVSOR Oscillator strength distribution df/de / ev -1 UVSOR 60 1) K. Nakagawa, Z. Jin, I. Shimoyama, Y. Miyake, M. Ueno, Y. Kishigami, H. Horiuchi, M. Tanaka, F. Kaneko, H. Nishimagi, H. Kobayashi and M. Kotani, Radiat. Phys. Chem., 77 (2008) ) M. Tanaka, K. Nakagawa, A. Agui, K. Fujii, A. Yokoya, Phys. Scr., T115 (2005) ) K. Nakagawa, Y. Izumi, M. Tanaka, M.Tanabe, Photon Factory Activity Report, 2010 #28 Part B (2011), p. 1. 4) R. L. Platzman, Vortex, 23 (1962) 372.,, 6 [II], (1975). 5), 9-1,, 2006 pp ) Viva Origino, 37 (2009) 24. 7),, 22 (1967) ) J. Berkowitz, Atomic and Molecular Photoabsorption, Academic Press, ) Y. Hatano, M. Inokuti, Photoabsorption, photoionization and photodissociation cross section, in: IAEA- TECDOC-799, Atomic and Molecular Data for Radiotherapy and Radiation Research, 1995, pp ) M. Kamohara, Y. Izumi, M. Tanaka, K. Okamoto, M. Tanaka, F. Kaneko, Y. Kodama, T.Koketsu, K. Nakagawa, Rad. Phys. Chem., 77 (2008)

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