2008-08-07 version 1.0-1 -
1. VarySysDB 1.1 VaryGene2 1.2 LD Search system 1.3 Genome Browser (GBrowse) 2. - 2 -
1-1 Home - 3 -
VaryGene 2 1 VarySysDB Polymorphism Search Polymorphism Table Transcript Search Transcript Table Sequence View STR/SAR Search CNV Search CNV Table Keyword Search System Information CDS ID Definition VaryGene2 LD-Search (LD-bin) GBrowse HIT, HIX, VaryGene2 VaryGene2 * *H-InvDB (HIT) - 4 -
Polymorphism Search 1-2 Polymorphism Search Polymorphism Search AND OR Search For Analysis Result( ) AND OR Polymorphism dbsnp ID ID Polymorphism Table Download - 5 -
Polymorphism Table 1-3 Polymorphism Table Polymorphism Table HIT Classification H-Inv ID Transcript Table Link Sequence View GBrowse Transcript View Locus View Download - 6 -
Transcript Search 1-4 Transcript Search Transcript Search Polymorphisms Table Transcript H-Inv ID ID Transcript Table Link Sequence View GBrowse Transcript View Locus View Download - 7 -
Transcript Table 1-5 Transcript Table Transcript Table (STR) (SAR) Transcript H-Inv ID Transcript Table Link Sequence View GBrowse Transcript View Locus View Download - 8 -
Sequence View 1-6 Sequence View Sequence View CDS Download - 9 -
STR/SAR Search 1-7 STR/SAR Search STR/SAR Search STR( ) SAR( ) Repeat H-Inv ID Transcript Table Link Transcript View Locus View Download - 10 -
CNV Search 1-8 CNV Search CNV Search Structural variation Variation ID CNV Table Download - 11 -
CNV Table 1-9 CNV Table CNV Table Download - 12 -
Keyword Search 1-10 Keyword Search ID Definition Keyword Search ID dbsnp ID Polymorphism Table - 13 -
System Information 1-11 System Information System Information VaryGene2-14 -
LD Search System 2-1 LD Search System LD Search System LD-bin LD-bin (D-haploDB Phase II on Build 36) LD-bin D-HaploDB web (http://finch.gen.kyushu-u.ac.jp/) (1) - 15 -
GBrowse 3-1 GBrowse VarySysDB GBrowse HIT HIX GBrowse Gbowse VarySysDB GBrowse URL http://www.gmod.org/wiki/index.php/gbrowse - 16 -
LD-bin (Definitive haplotype) ( ) ( ) ( DDBJ ) 1. Higasa, K., Miyatake, K., Kukita, Y., Tahira, T. and Hayashi, K. (2007) D-HaploDB: a database of definitive haplotypes determined by genotyping complete hydatidiform mole samples. Nucl. Acids Res., 35, D685-689. - 17 -