R Commanderを用いたデータ解析

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1 1 / 82 R Commander Kengo NAGASHIMA Laboratory of Biostatistics, Department of Parmaceutical Technochemistry, Josai University

2 R R Commander 2 / 82 R, "The Comprehensive R Archive Network (CRAN)", ( ), R (2009/12/24, 2115 ) R ( )., R Commander GUI ( ), Web,,

3 R R Commander 3 / 82 R Commander Professor, John Fox (McMaster University) R R,

4 R R Commander 4 / 82 R R Commander,,,,

5 Win R R Commander 5 / 82 R (1-1) Windows R "R win32.exe", 7, 6

6 Win R R Commander 6 / 82 R (1-2) CRAN ( Windows R

7 Win R R Commander 7 / 82 R (2),,

8 Win R R Commander 8 / 82 R (3),, " " " ",

9 Win R R Commander 9 / 82 R (4),, /Quick Launch, 2,,

10 Win R R Commander 10 / 82 R "R " (R )

11 Win R R Commander 11 / 82 R Commander R, R Commander, 12, 15

12 Win R R Commander 12 / 82 R Commander (1-1)... (Rcmdr_1.5-3.zip),, car_ zip, RcmdrPlugin.EstOR_1.0-1.zip,

13 Win R R Commander 13 / 82 R Commander (1-2), "Rcmdr". R Console library(rcmdr), Rcmdr OK, OK

14 Win R R Commander R Commander (1-3),, OK, / 82

15 Win R R Commander 15 / 82 R Commander (2-1) R Console install.packages("rcmdr", dependencies = TRUE), Enter, "Rcmdr",

16 Win R R Commander 16 / 82 R Commander (2-2),, Japan,,, Rcmdr MD5

17 Win R R Commander 17 / 82 R Commander (2-3), "Rcmdr". R Console library(rcmdr), Rcmdr OK

18 Win R R Commander 18 / 82 R Commander

19 Win R R Commander 19 / 82 R Commander,,, R Console detach("package:rcmdr"), R Commander library(rcmdr)

20 Win R R Commander 20 / 82 R "Edit" "GUI preferences..." "Language for menu and message" "ja" "Save" "Rconsole" (R ), ( ) R,

21 Win R R Commander 21 / 82 " cran.r-project.org 80 ",,, ".../Rgui.exe" --internet2

22 Mac R R Commander 22 / 82 R (1-1) Macintosh R (Mac OS X ) "R dmg", 24, 23

23 Mac R R Commander 23 / 82 R (1-2) CRAN ( Macintosh R

24 Mac R R Commander 24 / 82 R (2) R,, " "

25 Mac R R Commander 25 / 82 R (3) " ", "Continue", "Agree", " "

26 Mac R R Commander 26 / 82 R (4), OK,

27 Mac R R Commander 27 / 82 R Finder "R"

28 Mac R R Commander 28 / 82 R Commander R, R Commander, 29, 34

29 Mac R R Commander 29 / 82 R Commander (1-1),,

30 Mac R R Commander 30 / 82 R Commander (1-2), "Rcmdr_1.5-3.tgz", " ", "car_ tgz", " ", "RcmdrPlugin.EstOR_1.0-1.tar.gz", " "

31 Mac R R Commander 31 / 82 R Commander (1-3), "Rcmdr". R Console library(rcmdr), Rcmdr

32 Mac R R Commander 32 / 82 R Commander (1-4), OK,, OK,

33 Mac R R Commander 33 / 82 R Commander (1-5) 37

34 Mac R R Commander 34 / 82 R Commander (2-1) R Console install.packages("rcmdr", dependencies = TRUE), Enter, "Rcmdr",

35 Mac R R Commander 35 / 82 R Commander (2-2),, Japan,,,

36 Mac R R Commander 36 / 82 R Commander (2-3), "Rcmdr". R Console library(rcmdr), Rcmdr

37 Mac R R Commander 37 / 82 R Commander

38 Mac R R Commander 38 / 82 R Commander,,, R Console detach("package:rcmdr"), R Commander library(rcmdr)

39 Mac R R Commander R " " " " defaults write org.r-project.r force.lang en_us.utf -8, R R defaults write org.r-project.r force.lang ja_jp.utf -8, R R 39 / 82

40 Mac R R Commander 40 / 82

41 Mac R R Commander 41 / 82 R Commander

42 Matsuyama Y, et al. Second cancers after adjuvant tamoxifen therapy for breast cancer in Japan. Ann Oncol. 2000; 11: ,, 1996 ( ) % 464/2549=18.2%, 424/2352=18.0% 42 / 82

43 43 / % 3.5% ( ) 368/1215=30.3%, 253/760=33.3% ( ) 464/2549=7.2%, 424/2352=10.7%

44 44 / 82 "RcmdrPlugin.EstOR" R Commander, Rcmdr "RcmdrPlugin.EstOR", OK, OK

45 45 / 82 1 (Windows ) "tamoxifen.xls" Excel...

46 46 / 82 2 (Windows ), "Dataset" OK, "tamoxifen.xls",

47 47 / 82 3 (Windows ) ( ), "data", OK, Excel, R, Access

48 48 / 82 1 (Macintosh ) "tamoxifen_utf8.csv"...

49 49 / 82 2 (Macintosh ) "Dataset", " ", " ", " " OK,, "tamoxifen_utf8.csv",

50 50 / 82,, 25%,,, 75%,.,

51 51 / 82

52 52 / 82,, 2 :, :,,, OK

53 53 / %

54 54 / 82, (α = 0.05 ) H 0 : H 1 : P-value=0.873, α = 0.05

55 1, Fisher (α = 0.05 ) H 0 : 1 H 1 : 1 P-value=0.882, α = , 95% [0.87, 1.17] 55 / 82

56 56 / 82,,, :, :, :,, OK

57 57 / % 3.5%

58 58 / 82 1,,

59 59 / 82 2,,,,, binomial, logit, OK

60 ( ) logit(p ) = β + β x , P-value=0.873, α = 0.05, 60 / 82

61 61 / 82 Estimate odds ratio, "RcmdrPlugin.EstOR"

62 62 / 82 ( ) 1.01, 95% [0.87, 1.17]

63 63 / %, 1.01, 1,,

64 64 / 82 1,,

65 65 / 82 2,,,,, +, binomial, logit, OK Estimate odds ratio

66 ( )1, logit(p ) =β + β x 1 + β x , P-value<0.01, α = 0.05, 66 / 82

67 ( )2, 0.78, 95% [0.67, 0.91] 67 / 82

68 68 / % 3.5% 3%, 0.8,,

69 69 / 82 2,,,,, (, ), ( ),,,

70 70 / 82,

71 , ( ), Ctrl+A, 71 / 82

72 72 / 82, ( ),,

73 73 / 82 [1] R +R R 6 : R Commander R [GUI R] R Commander ( ( )) [2] The R Commander: A Basic-Statistics GUI for R R Commander, [3] R-Tips ( ) [4] R ( ) [5] R Tips ( ) [6] ( )

74 74 / car Anscombe, OK

75 75 / 82 "Anscombe" 1970 (Anscombe FJ. Computing in Statistical Science Through APL. Springer-Verlag ) education ($) income ($) young 18 (1000 ) urban (1000 ); ( )

76 76 / 82,, OK

77 77 / 82

78 78 / 82, OK,

79 79 / 82

80 80 / 82 x ( ), y ( ),, OK

81 81 / 82

82 82 / 82, PDF...

SAS Enterprise Guideによるデータ解析入門

SAS Enterprise Guideによるデータ解析入門 ........ 1 / 70.... SAS Enterprise Guide Kengo NAGASHIMA Laboratory of Biostatistics, Department of Parmaceutical Technochemistry, Josai University 2010 11 16 ........ 2 / 70 (SAS / SAS Enterprise Guide