BibTEX 1 2,a) 3 2011 11 22, 2012 5 12 bole BibTEX BibTEX 1 BibTeX Literature Management System Based on BibTEX for Laboratory Hiroyuki Ebara 1 Takahiro Ohtsuka 2,a) Yuki Yamakami 3 Received: November 22, 2011, Accepted: May 12, 2012 Abstract: The important things about managing literatures in laboratories are Sharing literatures between members and Easy to search literatures and to cite them in papers. Currently, many literature management tools have developed, but not enough to satisfy the above conditions. In this paper, we develop the literature management system bole that specializes in the use of laboratories. The proposed system is developed as the web application, and when literature information is registered in the system, research area, comment, evaluation, and so on about literatures are registered as additional information in order to facilitate sharing of literature information in laboratories. BibTEX is used in our laboratory to write a paper, therefore we develop functions convenient to use BibTEX, for example citation key can be copied with one click. We show the utility of the proposed system to share literature information easily in the laboratory, and efficiently to write the papers. Keywords: literature management system, Web application, BibTeX 1. 2 1 Kansai University Faculty of Engineering Science, Suita, Osaka 564 8680, Japan 2 Kansai University Graduate School of Science and Engineering, Suita, Osaka 564 8680, Japan 3 NHK a) t.o.0526@gmail.com 2 c 2012 Information Processing Society of Japan 2049
1 L A TEX BibTEX BibTEX bib bib \cite{ } BibTEX 3 bib bib L A TEX BibTEX BibTEX bib 2 bole BibTEX 2 3 bole 4 5 2. 2.1 BibTEX ( 1 ) Mendeley [1] \cite{ } BibTEX PDF BibTEX ( 2 ) Jabref [2] \cite{ } BibTEX PDF HTML ( 3 ) EndNote [3] Microsoft Office Word PubMed [4] Web [5] PDF EndNote Web BibTEX bib (4) Qref[6] PubMed CiNii [7] BibTEX bib (5) RefWorks[8] PubMed Microsoft Office Word RefShare c 2012 Information Processing Society of Japan 2050
1 Table 1 Literature management tools. bole Mendeley Jabref EndNote Qref RefWorks Papyres BibTEX BibTEX bib (6) Papyres[9] BibTEX bole 1 BibORB [10] Reference Manager [11] Cite U Like [12] 1 BibTEX 2.2 (1) [13] DRIP Discussion Reflection Investigation Preparation DRIP (2) [14] RITG Research Information Transition Graph RITG (3) [15] 5W1H (4) [16] 4 3 [13] [14] [15] 5W1H [16] [15] 3. bole 3.1 bole Bibliographic Organizer for Laboratory Environment 2 (1) 1 c 2012 Information Processing Society of Japan 2051
1 Fig. 1 Top page. (2) L A TEX BibTEX 1 BibTEX 3 bib BibTEX 3.2 Mendeley EndNote 1 2 3 2 Fig. 2 Link to show, edit, delete. 3 Fig. 3 4 Fig. 4 Link to the related web page. Link to each function. *1 4 3.3 BibTEX Google Scholar Yahoo! 5 6 *1 URL c 2012 Information Processing Society of Japan 2052
7 8 7 9 10 8 9 URL URL 9 3.4 11 1 7 Fig. 7 Literature selection in automatic registration. 5 Fig. 5 Key word input in automatic registration. Fig. 8 8 Additional information input. Fig. 6 6 List of retrieving literatures in automatic registration. c 2012 Information Processing Society of Japan 2053
12 Fig. 12 Citation key. 9 Fig. 9 Confirmation page of duplication in citation key. 10 Fig. 10 Literature information input in manual registration. 11 Fig. 11 Search page. 3.5 L A TEX bib 3.1 BibTEX 3 bib BibTEX bib BibTEX bib 4 boleyymmdd bib 1 bib bib L A TEX \cite{ } bib Mendeley Jabref \cite{ } 1 12 \cite{ } L A TEX BibTEX L A TEX 13 + + BibTEX c 2012 Information Processing Society of Japan 2054
Table 2 2 bole The literature management method before introducing bole. PoleManage 37% 56% 13% 4% 3 bole 5 Table 3 A feeling of use of bole. BibTEX 4.15 4.07 4.30 4.19 4.11 4 Table 4 Useful point in registration function. 1 89% 11% 37% 11% 13 Fig. 13 Example of citataion key. BibTEX author and and 1 noauthor BibTEX year 0000 2 00 + 01 02 03... url+ 6 4. 4.1 bole A 16 B 11 27 1 5 5 bole 2 3 1 Excel PoleManage *2 A 16 bole 3 4 bole bole 4 Web 1 Web *2 A c 2012 Information Processing Society of Japan 2055
5 Table 5 Items specified in search function. 48% 15% 78% 7% 7% 0% 7% 15% 48% 4% 6 5 Table 6 About search function. 3.93 3.59 4.26 7 TEX bib Table 7 Useful points in citation and export function. bib 59% 81% 8 5 Table 8 About comment. 3.30 2.78 2.96 A 3.25 3.19 3.44 B 3.36 2.18 2.77 5 6 bole 3 TEX bib 7 bib 1 bib 80% 8 3 3 8 A B A 3 B A bole bole 9 bole 10 bole 27 Mendeley 11 3 bole Mendeley Mendeley bole bole Mendeley bole 4.2 MySQL 12 MySQL 200 400 600 800 1,000 100 SELECT 10 14 [ms] 1,000 8ms MySQL c 2012 Information Processing Society of Japan 2056
9 Table 9 The item which was helpful especially as literature information. 62% 35% 81% 27% 12% 4% 12% 27% 50% 10 5 Table 10 About search field etc. 9 4.07 4.35 11 Mendeley bole 5 Table 11 Is bole easy to use as compared with Mendeley. BibTEX 3.88 3.92 4.19 12 Table 12 Performance of a server. OS CPU Debian Intel(R) Xeon(R) (2.4 GHz) 4GB Fig. 15 15 Experimental result of functional evaluation. 14 MySQL Fig. 14 Experimental result of MySQL. 50 15 [ms] 373 15 250 1 4.3 2 bole 2 BibTEX Mendeley 2 bole BibTEX bole bole 14 1,000 8ms BibTEX c 2012 Information Processing Society of Japan 2057
5. 2 2 2 bole BibTEX BibTEX BibTEX bib bib bole bib 1 Lead2Amazon [17] bib bib bib [1] Ltd, M.: Academic reference management software for researchers Mendeley, Mendeley Ltd (online), available from http://www.mendeley.com (accessed 2012-02-22). [2] SourceForge: JabRef reference manager, SourceForge (online), available from http://jabref.sourceforge.net (accessed 2012-02-22). [3] USACO USACO EndNote USACO http://www.usaco.co.jp/products/ isi rs/endnote.html 2012-02-22. [4] NCBI: Home - PubMed - NCBI, NCBI (online), available from http://www.ncbi.nlm.nih.gov/pubmed (accessed 2012-02-22). [5] Web http://login.jamas.or.jp 2012-02-22. [6] QRef /QRef/ /PubMed QRef http://members3.jcom.home.ne.jp/ qref/ 2012-02-22. [7] NII CiNii Articles NII http://ci.nii.ac.jp 2012-02-22. [8] SUNMEDIA: RefWorks, SUNMEDIA (online), available from http://www.sunmedia.co.jp/e-port/refworks/ (accessed 2012-02-22). [9] Naak, A., Hage, H. and Aïmeur, E.: Papyres: A Research Paper Management System, 2008 10th IEEE Conference on E-Commerce Technology and the 5th IEEE Conference on Enterprise Computing, E- Commerce and E-Services, pp.201 208, IEEE (2008). [10] SourceForge.JP: BibORB: Translate Description for Japanese SourceForge.JP, SourceForge.JP (online), available from http://en.sourceforge.jp/projects/ freshmeat biborb/translate (accessed 2012-02-22). [11] REUTERS, T. Reference Manager http://www.ddmcorp.com/goods/ refe/reference manager.html 2012-02-22. [12] Springer: CiteULike, Springer (online), available from http://www.citeulike.org/ (accessed 2012-02-22). [13] Vol.51, No.6, pp.1357 1370 (2010) http://ci.nii.ac.jp/naid/110007970738. [14] < > D Vol.91, No.3, pp.639 653 (2008) http://ci.nii.ac.jp/naid/110007381001. [15] AI AI AI Vol.106, No.617, pp.29 32 (2007) c 2012 Information Processing Society of Japan 2058
http://ci.nii.ac.jp/naid/110006277651. [16] JSIS &JASI (2010) http://jglobal.jst.go.jp/public/20090422/ 201002208744410706. [17] Lead2Amazon Tokyo University http://lead.to/amazon/jp/ 2012-02-22. bole A.1 bole / / PoleManage / / A.2 A.2.1 / / / / A.2.2 1 / / / A.3 A.3.1 / / / / A.3.2 / / / / / / / / / A.3.3 / / / / A.3.4 / / / / A.3.5 / / / / A.4 TEX bib A.4.1 / / / / A.4.2 1 \cite{ } / 1 bib / A.5 A.5.1 / / / / A.5.2 / / / / A.5.3 / / / / A.5.4 / / / / A.5.5 / / / / / / / / A.5.6 5.5 / / c 2012 Information Processing Society of Japan 2059
/ / A.6 bole A.6.1 / / / / 1988 2010 Web A.6.2 / / / / A.7 Mendeley A.7.1 / / / / 1986 2009 2011 A.7.2 / / / / A.7.3 TEX bib / / / / 1982 1987 1994 IEEE ACM c 2012 Information Processing Society of Japan 2060